Protein–RNA interactions for Protein: O95696

BRD1, Bromodomain-containing protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1O95696 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
BRD1O95696 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.53■□□□□ 0.4
BRD1O95696 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
BRD1O95696 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
BRD1O95696 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
BRD1O95696 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.53■□□□□ 0.4
BRD1O95696 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.53■□□□□ 0.4
BRD1O95696 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.53■□□□□ 0.4
BRD1O95696 AC114501.2-201ENST00000439631 535 ntBASIC17.53■□□□□ 0.4
BRD1O95696 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.53■□□□□ 0.4
BRD1O95696 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.53■□□□□ 0.4
BRD1O95696 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.53■□□□□ 0.4
BRD1O95696 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.53■□□□□ 0.4
BRD1O95696 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.53■□□□□ 0.4
BRD1O95696 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.53■□□□□ 0.4
BRD1O95696 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.53■□□□□ 0.4
BRD1O95696 AC009407.1-201ENST00000568958 598 ntBASIC17.53■□□□□ 0.4
BRD1O95696 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.53■□□□□ 0.4
BRD1O95696 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 KRT8P22-201ENST00000562317 1415 ntBASIC17.53■□□□□ 0.4
BRD1O95696 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.53■□□□□ 0.4
BRD1O95696 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.53■□□□□ 0.4
BRD1O95696 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
BRD1O95696 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRD1O95696 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
BRD1O95696 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRD1O95696 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BRD1O95696 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRD1O95696 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.52■□□□□ 0.4
BRD1O95696 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRD1O95696 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.52■□□□□ 0.4
BRD1O95696 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
BRD1O95696 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.52■□□□□ 0.4
BRD1O95696 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.52■□□□□ 0.4
BRD1O95696 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRD1O95696 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
BRD1O95696 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BRD1O95696 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.52■□□□□ 0.4
BRD1O95696 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.52■□□□□ 0.4
BRD1O95696 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.52■□□□□ 0.4
BRD1O95696 AL645937.2-201ENST00000396808 931 ntBASIC17.52■□□□□ 0.4
BRD1O95696 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRD1O95696 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.52■□□□□ 0.4
BRD1O95696 ARSEP1-201ENST00000420443 635 ntBASIC17.52■□□□□ 0.4
BRD1O95696 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.52■□□□□ 0.4
BRD1O95696 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.52■□□□□ 0.4
BRD1O95696 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BRD1O95696 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
BRD1O95696 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.52■□□□□ 0.4
BRD1O95696 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.52■□□□□ 0.4
BRD1O95696 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.52■□□□□ 0.4
BRD1O95696 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.52■□□□□ 0.4
BRD1O95696 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRD1O95696 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRD1O95696 AC005252.3-201ENST00000623855 2258 ntBASIC17.52■□□□□ 0.4
BRD1O95696 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BRD1O95696 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
BRD1O95696 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRD1O95696 KRT8P24-201ENST00000560290 1559 ntBASIC17.52■□□□□ 0.39
BRD1O95696 AC022144.1-201ENST00000602255 1580 ntBASIC17.52■□□□□ 0.39
BRD1O95696 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRD1O95696 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BRD1O95696 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRD1O95696 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
BRD1O95696 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRD1O95696 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BRD1O95696 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRD1O95696 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
BRD1O95696 CICP16-201ENST00000502609 2813 ntBASIC17.52■□□□□ 0.39
BRD1O95696 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.52■□□□□ 0.39
BRD1O95696 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRD1O95696 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.51■□□□□ 0.39
BRD1O95696 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.51■□□□□ 0.39
BRD1O95696 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRD1O95696 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRD1O95696 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRD1O95696 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.51■□□□□ 0.39
BRD1O95696 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BRD1O95696 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRD1O95696 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRD1O95696 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRD1O95696 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.51■□□□□ 0.39
BRD1O95696 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
BRD1O95696 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRD1O95696 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRD1O95696 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BRD1O95696 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms