Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL021707.6-201ENST00000609212 491 ntBASIC6.49□□□□□ -1.37
USH2AO75445 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC6.49□□□□□ -1.37
USH2AO75445 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 OR51A9P-201ENST00000422578 911 ntBASIC6.49□□□□□ -1.37
USH2AO75445 AC018638.5-201ENST00000450885 754 ntBASIC6.49□□□□□ -1.37
USH2AO75445 DUX4L50-201ENST00000455245 715 ntBASIC6.49□□□□□ -1.37
USH2AO75445 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC6.49□□□□□ -1.37
USH2AO75445 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC6.49□□□□□ -1.37
USH2AO75445 RBM7-208ENST00000545678 867 ntTSL 3 BASIC6.49□□□□□ -1.37
USH2AO75445 COX5A-205ENST00000568517 582 ntTSL 3 BASIC6.49□□□□□ -1.37
USH2AO75445 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
USH2AO75445 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 AC147876.1-201ENST00000504408 322 ntBASIC6.49□□□□□ -1.37
USH2AO75445 HINT1-205ENST00000508488 703 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 AC079414.2-201ENST00000567157 1104 ntBASIC6.49□□□□□ -1.37
USH2AO75445 EMP3-204ENST00000596315 761 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC6.49□□□□□ -1.37
USH2AO75445 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 AC002511.3-201ENST00000638098 420 ntBASIC6.49□□□□□ -1.37
USH2AO75445 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC6.49□□□□□ -1.37
USH2AO75445 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USH2AO75445 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC6.49□□□□□ -1.37
USH2AO75445 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC6.49□□□□□ -1.37
USH2AO75445 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC6.48□□□□□ -1.37
USH2AO75445 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
USH2AO75445 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
USH2AO75445 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 AL954722.1-201ENST00000431238 259 ntBASIC6.48□□□□□ -1.37
USH2AO75445 AC133141.1-201ENST00000443015 339 ntBASIC6.48□□□□□ -1.37
USH2AO75445 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 CDC37P2-201ENST00000562287 1029 ntBASIC6.48□□□□□ -1.37
USH2AO75445 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 GATB-213ENST00000515812 1893 ntTSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC6.48□□□□□ -1.37
USH2AO75445 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USH2AO75445 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC6.48□□□□□ -1.37
USH2AO75445 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms