Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
SEC22BO75396 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
SEC22BO75396 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SEC22BO75396 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC22BO75396 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC22BO75396 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC22BO75396 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.55□□□□□ -0.08
SEC22BO75396 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.55□□□□□ -0.08
SEC22BO75396 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC22BO75396 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC22BO75396 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.55□□□□□ -0.08
SEC22BO75396 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.55□□□□□ -0.08
SEC22BO75396 AC104794.3-201ENST00000566840 1248 ntBASIC14.55□□□□□ -0.08
SEC22BO75396 AC139530.3-201ENST00000620344 690 ntBASIC14.55□□□□□ -0.08
SEC22BO75396 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC22BO75396 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.55□□□□□ -0.08
SEC22BO75396 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SEC22BO75396 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SEC22BO75396 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SEC22BO75396 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
SEC22BO75396 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
SEC22BO75396 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SEC22BO75396 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.54□□□□□ -0.08
SEC22BO75396 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 AC023090.2-201ENST00000625182 2110 ntBASIC14.54□□□□□ -0.08
SEC22BO75396 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.54□□□□□ -0.08
SEC22BO75396 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SEC22BO75396 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.54□□□□□ -0.08
SEC22BO75396 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.54□□□□□ -0.08
SEC22BO75396 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SEC22BO75396 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SEC22BO75396 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.54□□□□□ -0.08
SEC22BO75396 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SEC22BO75396 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.54□□□□□ -0.08
SEC22BO75396 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.54□□□□□ -0.08
SEC22BO75396 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
SEC22BO75396 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.54□□□□□ -0.08
SEC22BO75396 VDAC1P7-201ENST00000462417 847 ntBASIC14.54□□□□□ -0.08
SEC22BO75396 DOC2GP-202ENST00000514950 1163 ntBASIC14.54□□□□□ -0.08
SEC22BO75396 AC023310.3-201ENST00000557027 670 ntBASIC14.54□□□□□ -0.08
SEC22BO75396 AC100756.1-201ENST00000562736 682 ntBASIC14.54□□□□□ -0.08
SEC22BO75396 AC138749.3-201ENST00000567691 622 ntBASIC14.54□□□□□ -0.08
SEC22BO75396 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.54□□□□□ -0.08
SEC22BO75396 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.54□□□□□ -0.08
SEC22BO75396 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.54□□□□□ -0.08
SEC22BO75396 AC116165.1-201ENST00000611806 668 ntBASIC14.54□□□□□ -0.08
SEC22BO75396 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.54□□□□□ -0.08
SEC22BO75396 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.54□□□□□ -0.08
SEC22BO75396 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.54□□□□□ -0.08
SEC22BO75396 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.54□□□□□ -0.08
SEC22BO75396 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
SEC22BO75396 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.54□□□□□ -0.08
SEC22BO75396 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SEC22BO75396 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SEC22BO75396 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SEC22BO75396 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.54□□□□□ -0.08
SEC22BO75396 AC027601.5-201ENST00000624065 2482 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms