Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC7O00311 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDC7O00311 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC7O00311 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC7O00311 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CDC7O00311 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC7O00311 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC7O00311 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC7O00311 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CDC7O00311 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.77□□□□□ -0.04
CDC7O00311 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDC7O00311 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC7O00311 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.77□□□□□ -0.05
CDC7O00311 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.77□□□□□ -0.05
CDC7O00311 AC190387.1-201ENST00000551683 408 ntBASIC14.77□□□□□ -0.05
CDC7O00311 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.77□□□□□ -0.05
CDC7O00311 MIR4745-201ENST00000577608 62 ntBASIC14.77□□□□□ -0.05
CDC7O00311 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.77□□□□□ -0.05
CDC7O00311 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CDC7O00311 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.77□□□□□ -0.05
CDC7O00311 AP005019.2-201ENST00000615104 511 ntBASIC14.77□□□□□ -0.05
CDC7O00311 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
CDC7O00311 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CDC7O00311 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CDC7O00311 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CDC7O00311 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CDC7O00311 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CDC7O00311 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.77□□□□□ -0.05
CDC7O00311 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CDC7O00311 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CDC7O00311 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDC7O00311 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC7O00311 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CDC7O00311 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC7O00311 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.76□□□□□ -0.05
CDC7O00311 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDC7O00311 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.76□□□□□ -0.05
CDC7O00311 PIN1P1-201ENST00000412108 996 ntBASIC14.76□□□□□ -0.05
CDC7O00311 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.76□□□□□ -0.05
CDC7O00311 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.76□□□□□ -0.05
CDC7O00311 AC140912.1-201ENST00000577171 1054 ntBASIC14.76□□□□□ -0.05
CDC7O00311 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.76□□□□□ -0.05
CDC7O00311 AC004466.1-201ENST00000599515 1080 ntBASIC14.76□□□□□ -0.05
CDC7O00311 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.76□□□□□ -0.05
CDC7O00311 CU634019.7-201ENST00000624153 1185 ntBASIC14.76□□□□□ -0.05
CDC7O00311 FP236241.2-201ENST00000624906 1185 ntBASIC14.76□□□□□ -0.05
CDC7O00311 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC7O00311 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.76□□□□□ -0.05
CDC7O00311 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CDC7O00311 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 LRRC59-203ENST00000576448 1531 ntBASIC14.76□□□□□ -0.05
CDC7O00311 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CDC7O00311 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.76□□□□□ -0.05
CDC7O00311 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDC7O00311 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC7O00311 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDC7O00311 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CDC7O00311 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDC7O00311 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.75□□□□□ -0.05
CDC7O00311 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms