Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 RN7SL767P-201ENST00000493013 295 ntBASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 RPS23-207ENST00000511844 530 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 CTBP2P6-201ENST00000526402 1229 ntBASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 AC022211.2-201ENST00000585075 2527 ntBASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 AL596087.1-201ENST00000400979 1969 ntBASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM88BA6NKF7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 RHOQP2-201ENST00000449922 579 ntBASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 RN7SL564P-201ENST00000496309 250 ntBASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 AC023968.2-201ENST00000560593 1049 ntBASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 AC080013.5-201ENST00000607044 679 ntBASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 AC004466.2-201ENST00000614749 516 ntBASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 AC090510.3-201ENST00000615831 821 ntBASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM88BA6NKF7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 AL359258.3-201ENST00000622910 2331 ntBASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 OLA1P2-201ENST00000395519 1264 ntBASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 RN7SL602P-201ENST00000578326 324 ntBASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 RN7SL718P-201ENST00000581254 303 ntBASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM88BA6NKF7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms