Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 HLA-V-204ENST00000476601 1289 ntBASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 SDHAP3-202ENST00000515467 728 ntBASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 AL109936.8-201ENST00000641772 604 ntBASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 AC092053.3-201ENST00000641308 4975 ntBASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 AC015802.1-201ENST00000588104 1449 ntBASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 AL360270.3-201ENST00000609118 1348 ntBASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GOLGA6L4A6NEF3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 AL512356.2-201ENST00000546955 174 ntBASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 AC051619.7-201ENST00000568314 623 ntBASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 AC010327.4-202ENST00000591484 748 ntBASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC17.43■□□□□ 0.38
GOLGA6L4A6NEF3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 AC010327.5-201ENST00000586923 3061 ntBASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 AC112482.1-201ENST00000492080 688 ntBASIC17.42■□□□□ 0.38
GOLGA6L4A6NEF3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms