Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 CICP13-201ENST00000422015 2789 ntBASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 FGFR3P1-201ENST00000449999 601 ntBASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 AC073150.1-201ENST00000450406 1084 ntBASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 CICP11-201ENST00000434745 2827 ntBASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC187A0A096LP49 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 MBLAC2-202ENST00000514906 1936 ntBASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 TBC1D3J-201ENST00000620719 1426 ntBASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 AC239868.1-201ENST00000369385 493 ntBASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 AC098935.1-201ENST00000446057 611 ntBASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 KLF2P1-201ENST00000447438 1042 ntBASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 AP003419.4-201ENST00000616071 517 ntBASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 FAM90A7P-201ENST00000382628 1395 ntBASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 FAM90A23P-201ENST00000400136 1395 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms