Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 TEKT4P2-202ENST00000559466 1312 ntBASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 PPIA-208ENST00000489459 907 ntTSL 2 BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 KRT8P2-201ENST00000556193 944 ntBASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 PPIA-210ENST00000620047 827 ntTSL 5 BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BIVM-ERCC5R4GMW8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 IDS-203ENST00000428056 1213 ntTSL 2 BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC018638.5-201ENST00000450885 754 ntBASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 OR2A1-AS1-210ENST00000496968 531 ntBASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC093909.3-201ENST00000504783 336 ntBASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC093826.1-201ENST00000508655 993 ntBASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC140658.4-201ENST00000561990 352 ntBASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 MIR4472-1-201ENST00000584349 80 ntBASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC007250.1-201ENST00000608934 338 ntBASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 FO393412.1-201ENST00000619841 382 ntBASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC018442.1-201ENST00000421439 2061 ntBASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
BIVM-ERCC5R4GMW8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 LINC00265-2P-201ENST00000413372 782 ntBASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 HERC2P11-201ENST00000562845 725 ntBASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC100756.2-201ENST00000569537 736 ntBASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC073592.2-201ENST00000623062 780 ntBASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 LINC00431-202ENST00000636375 159 ntBASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 RNVU1-8-201ENST00000364272 125 ntBASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 RPL3P2-204ENST00000413027 1203 ntBASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 CSNK1G2P1-201ENST00000442675 955 ntBASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC012073.1-201ENST00000606114 1108 ntBASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC006158.1-201ENST00000610661 249 ntBASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
BIVM-ERCC5R4GMW8 AC091951.1-201ENST00000512854 2465 ntBASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms