Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 AC136759.1-202ENST00000530858 2194 ntBASIC17.16■□□□□ 0.34
CLIC4Q9Y696 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLIC4Q9Y696 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 BCRP1-201ENST00000444246 691 ntBASIC17.15■□□□□ 0.34
CLIC4Q9Y696 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 AP005019.2-201ENST00000615104 511 ntBASIC17.15■□□□□ 0.34
CLIC4Q9Y696 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLIC4Q9Y696 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLIC4Q9Y696 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLIC4Q9Y696 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 AC236430.1-201ENST00000402231 743 ntBASIC17.14■□□□□ 0.33
CLIC4Q9Y696 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 GIMAP3P-201ENST00000495150 836 ntBASIC17.14■□□□□ 0.33
CLIC4Q9Y696 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 WFDC1-204ENST00000613603 549 ntBASIC17.14■□□□□ 0.33
CLIC4Q9Y696 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLIC4Q9Y696 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 MSTO2P-201ENST00000314835 1709 ntBASIC17.13■□□□□ 0.33
CLIC4Q9Y696 AC003102.2-201ENST00000589195 1469 ntBASIC17.13■□□□□ 0.33
CLIC4Q9Y696 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 LRRC59-203ENST00000576448 1531 ntBASIC17.13■□□□□ 0.33
CLIC4Q9Y696 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CLIC4Q9Y696 AC087499.6-201ENST00000411576 835 ntBASIC17.13■□□□□ 0.33
CLIC4Q9Y696 AC002472.2-201ENST00000442739 958 ntBASIC17.13■□□□□ 0.33
CLIC4Q9Y696 FAM207CP-201ENST00000443486 507 ntBASIC17.13■□□□□ 0.33
CLIC4Q9Y696 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms