Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGC4Q9Y5F7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 AC013726.1-201ENST00000563747 2285 ntBASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 MESTP3-201ENST00000503460 968 ntBASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 AP005482.1-201ENST00000563722 1273 ntBASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 AC133552.6-201ENST00000613406 534 ntBASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 MIR6805-201ENST00000615055 62 ntBASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 COX11-210ENST00000639671 696 ntBASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 MYO15B-237ENST00000642007 4893 ntBASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 CICP14-201ENST00000629111 2732 ntBASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 AL354989.2-201ENST00000435838 1540 ntBASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGC4Q9Y5F7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 AC018442.1-201ENST00000421439 2061 ntBASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 AC020910.5-201ENST00000623668 1865 ntBASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 CD8B2-202ENST00000417670 633 ntBASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 FAM8A4P-201ENST00000435433 1213 ntBASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 KRT223P-202ENST00000449164 1292 ntBASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 FTLP10-202ENST00000505798 471 ntBASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 AL391280.1-201ENST00000506969 1062 ntBASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms