Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 AC112504.1-201ENST00000623415 1841 ntBASIC16.22■□□□□ 0.19
SSX2IPQ9Y2D8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 AC106872.11-201ENST00000605838 421 ntBASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SSX2IPQ9Y2D8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.21■□□□□ 0.18
SSX2IPQ9Y2D8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SSX2IPQ9Y2D8 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.21■□□□□ 0.18
SSX2IPQ9Y2D8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SSX2IPQ9Y2D8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 AC127383.1-201ENST00000444697 1800 ntBASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 PPY2P-201ENST00000582808 702 ntBASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.2■□□□□ 0.18
SSX2IPQ9Y2D8 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms