Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 AC006058.4-201ENST00000624016 1670 ntBASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 E2F3P2-201ENST00000447755 1422 ntBASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 RNMTL1P1-201ENST00000454103 560 ntBASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 AL606495.2-201ENST00000605867 535 ntBASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 BX088702.1-201ENST00000610784 235 ntBASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 AC138649.2-201ENST00000615886 705 ntBASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 AC023157.3-201ENST00000619086 2088 ntBASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.1■□□□□ 0.49
DENND2AQ9ULE3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 DPM3-202ENST00000368399 517 ntBASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 AC016700.1-201ENST00000429424 312 ntBASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 EIF4HP1-201ENST00000453115 687 ntBASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 HIST2H2BC-201ENST00000498492 580 ntBASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 AC005740.2-201ENST00000511085 419 ntBASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 ACTG1P17-201ENST00000558391 1119 ntBASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
DENND2AQ9ULE3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 TCAF2P1-201ENST00000291129 2421 ntBASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DENND2AQ9ULE3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DENND2AQ9ULE3 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms