Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PNMA3Q9UL41 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 AC078875.1-201ENST00000431907 724 ntBASIC17.23■□□□□ 0.35
PNMA3Q9UL41 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PNMA3Q9UL41 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 CICP11-201ENST00000434745 2827 ntBASIC17.22■□□□□ 0.35
PNMA3Q9UL41 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 CICP13-201ENST00000422015 2789 ntBASIC17.22■□□□□ 0.35
PNMA3Q9UL41 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 TLE1P1-201ENST00000422965 589 ntBASIC17.22■□□□□ 0.35
PNMA3Q9UL41 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 KLF2P1-201ENST00000447438 1042 ntBASIC17.22■□□□□ 0.35
PNMA3Q9UL41 RN7SL258P-201ENST00000478664 300 ntBASIC17.22■□□□□ 0.35
PNMA3Q9UL41 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 SCARNA21-201ENST00000517026 139 ntBASIC17.22■□□□□ 0.35
PNMA3Q9UL41 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 AC005962.1-201ENST00000584100 773 ntBASIC17.22■□□□□ 0.35
PNMA3Q9UL41 MIR6720-201ENST00000611664 98 ntBASIC17.22■□□□□ 0.35
PNMA3Q9UL41 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 AC051619.9-201ENST00000623237 597 ntBASIC17.22■□□□□ 0.35
PNMA3Q9UL41 AP003400.6-201ENST00000624698 740 ntBASIC17.22■□□□□ 0.35
PNMA3Q9UL41 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 Z98259.2-201ENST00000641583 609 ntBASIC17.22■□□□□ 0.35
PNMA3Q9UL41 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.22■□□□□ 0.35
PNMA3Q9UL41 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms