Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 AC006486.2-201ENST00000624246 2199 ntBASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 MROH4P-201ENST00000431302 1578 ntBASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 AL137783.1-201ENST00000623494 1896 ntBASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.38□□□□□ -0.11
HCN3Q9P1Z3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 AC055811.4-201ENST00000624039 1754 ntBASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 AL138709.1-201ENST00000614840 1693 ntBASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 AC022210.1-201ENST00000449856 793 ntBASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 KLF2P4-201ENST00000451959 1225 ntBASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 AL590640.2-201ENST00000457038 527 ntBASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 AC025279.2-201ENST00000569730 653 ntBASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 MIR6775-201ENST00000617557 69 ntBASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HCN3Q9P1Z3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 WASH3P-207ENST00000560956 1394 ntBASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 FAM197Y7-201ENST00000432892 766 ntBASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 AC104989.1-201ENST00000519711 778 ntBASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 KRT90P-201ENST00000549264 1064 ntBASIC14.36□□□□□ -0.11
HCN3Q9P1Z3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms