Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM248Q9NWD8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 CHMP1AP1-201ENST00000445563 662 ntBASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 AL355994.2-201ENST00000447882 704 ntBASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 AP006547.1-201ENST00000563435 692 ntBASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 MIR4683-201ENST00000579659 81 ntBASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 AC002472.3-201ENST00000640124 621 ntBASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 MTHFR-210ENST00000641407 2387 ntBASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 AL596257.1-201ENST00000641463 2694 ntBASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TMEM248Q9NWD8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 KRT8P4-201ENST00000509735 1454 ntBASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 FAM21FP-201ENST00000426241 1131 ntBASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 AC092135.3-201ENST00000624151 1846 ntBASIC15.29■□□□□ 0.04
TMEM248Q9NWD8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 AL390755.1-201ENST00000623716 2027 ntBASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 MRPL37P1-201ENST00000592451 1337 ntBASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM248Q9NWD8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms