Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 POM121L8P-201ENST00000417732 1281 ntBASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 POM121L9P-203ENST00000441984 1285 ntBASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 AL022328.1-201ENST00000610050 478 ntBASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 ENPP7P14-201ENST00000621765 1040 ntBASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 AC099063.4-201ENST00000641099 1602 ntBASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMC4Q9NTJ3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 AL590640.2-201ENST00000457038 527 ntBASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 FTH1P14-201ENST00000482930 551 ntBASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 RN7SL48P-201ENST00000579283 293 ntBASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 AC007292.2-201ENST00000593524 1812 ntBASIC19.28■□□□□ 0.68
SMC4Q9NTJ3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 CLUHP2-201ENST00000426660 1303 ntBASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 CR383656.12-201ENST00000549567 513 ntBASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 ECM1P1-201ENST00000604092 1279 ntBASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 AC244669.2-201ENST00000612320 853 ntBASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC19.27■□□□□ 0.68
SMC4Q9NTJ3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMC4Q9NTJ3 AC003102.2-201ENST00000589195 1469 ntBASIC19.27■□□□□ 0.67
SMC4Q9NTJ3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMC4Q9NTJ3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMC4Q9NTJ3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMC4Q9NTJ3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMC4Q9NTJ3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMC4Q9NTJ3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMC4Q9NTJ3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMC4Q9NTJ3 AC015656.1-201ENST00000624209 3578 ntBASIC19.27■□□□□ 0.67
SMC4Q9NTJ3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMC4Q9NTJ3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SMC4Q9NTJ3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMC4Q9NTJ3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMC4Q9NTJ3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SMC4Q9NTJ3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMC4Q9NTJ3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms