Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
C12orf4Q9NQ89 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf4Q9NQ89 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.23□□□□□ -0.29
C12orf4Q9NQ89 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf4Q9NQ89 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf4Q9NQ89 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
C12orf4Q9NQ89 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C12orf4Q9NQ89 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.23□□□□□ -0.29
C12orf4Q9NQ89 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
C12orf4Q9NQ89 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.23□□□□□ -0.29
C12orf4Q9NQ89 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 AC136604.1-201ENST00000418535 575 ntBASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 SPCS2P4-201ENST00000436160 681 ntBASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 AC140113.2-201ENST00000604370 208 ntBASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 AC026120.1-201ENST00000611536 926 ntBASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 AC092902.6-201ENST00000641783 218 ntBASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C12orf4Q9NQ89 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 FGD5P1-202ENST00000614866 2498 ntBASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
C12orf4Q9NQ89 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms