Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 AL928921.2-201ENST00000641325 2442 ntBASIC15.92■□□□□ 0.14
CD248Q9HCU0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 HAUS4P1-201ENST00000406739 1145 ntBASIC15.92■□□□□ 0.14
CD248Q9HCU0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 ENPP7P5-201ENST00000541031 1031 ntBASIC15.92■□□□□ 0.14
CD248Q9HCU0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 AC000095.1-201ENST00000603208 874 ntBASIC15.92■□□□□ 0.14
CD248Q9HCU0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 REXO1L6P-201ENST00000603433 1515 ntBASIC15.92■□□□□ 0.14
CD248Q9HCU0 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 INTS4P2-202ENST00000614726 2019 ntBASIC15.92■□□□□ 0.14
CD248Q9HCU0 HAL-202ENST00000538703 2637 ntTSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CD248Q9HCU0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CD248Q9HCU0 AGAP7P-201ENST00000582299 2062 ntBASIC15.91■□□□□ 0.14
CD248Q9HCU0 AGAP14-201ENST00000624701 2060 ntBASIC15.91■□□□□ 0.14
CD248Q9HCU0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 AJ011931.1-201ENST00000618749 2492 ntBASIC15.91■□□□□ 0.14
CD248Q9HCU0 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 KRT43P-201ENST00000434019 910 ntBASIC15.91■□□□□ 0.14
CD248Q9HCU0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 AP001889.1-201ENST00000525414 633 ntBASIC15.91■□□□□ 0.14
CD248Q9HCU0 CLUHP6-201ENST00000580789 941 ntBASIC15.91■□□□□ 0.14
CD248Q9HCU0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 AL450472.2-201ENST00000603663 1156 ntBASIC15.91■□□□□ 0.14
CD248Q9HCU0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 MBLAC2-202ENST00000514906 1936 ntBASIC15.91■□□□□ 0.14
CD248Q9HCU0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms