Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J3Q9H1A7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 NUS1P3-201ENST00000423502 862 ntBASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 AC241585.1-201ENST00000433527 519 ntBASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 AC009477.1-201ENST00000452936 217 ntBASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 AC015802.1-201ENST00000588104 1449 ntBASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 PTENP1-202ENST00000532280 3996 ntBASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
POLR2J3Q9H1A7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 TPT1P11-201ENST00000458482 498 ntBASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR2J3Q9H1A7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms