Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 AL592076.1-201ENST00000424448 303 ntBASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 RPL8P2-201ENST00000430538 502 ntBASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 RN7SL67P-201ENST00000492147 296 ntBASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 AL161773.1-201ENST00000624845 863 ntBASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
UBE2OQ9C0C9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 FAM90A2P-201ENST00000511144 1395 ntBASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 FAM90A25P-201ENST00000528404 1395 ntBASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 AL365203.3-201ENST00000609742 2057 ntBASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 OR2K2-202ENST00000374428 1038 ntBASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 AL512430.1-201ENST00000392575 860 ntBASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 AL645937.2-201ENST00000396808 931 ntBASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 ETV2-207ENST00000619399 994 ntTSL 5 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 MIR6858-201ENST00000620733 67 ntBASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 AC144831.1-201ENST00000573312 2656 ntBASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UBE2OQ9C0C9 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 CAP2P1-201ENST00000557743 1390 ntBASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBE2OQ9C0C9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms