Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 AC074044.1-201ENST00000609673 707 ntBASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 TEX28P1-201ENST00000613479 1221 ntBASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 TEX28P2-201ENST00000617764 1221 ntBASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 COL6A4P2-202ENST00000504443 2753 ntBASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 AC055811.4-201ENST00000624039 1754 ntBASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
AMBRA1Q9C0C7 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 TSSK5P-201ENST00000423978 907 ntBASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 TPT1P11-201ENST00000458482 498 ntBASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 AC027369.6-201ENST00000525520 931 ntBASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 SAMD11P1-201ENST00000571429 661 ntBASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 AJ011932.1-201ENST00000621707 465 ntBASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 AL590560.3-201ENST00000623350 461 ntBASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 AC100757.3-201ENST00000622361 1406 ntBASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AMBRA1Q9C0C7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.12□□□□□ -0.15
AMBRA1Q9C0C7 AC093214.1-201ENST00000511688 1107 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms