Protein–RNA interactions for Protein: Q9C0C4

SEMA4C, Semaphorin-4C, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4CQ9C0C4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SEMA4CQ9C0C4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.11
SEMA4CQ9C0C4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.33□□□□□ -0.11
SEMA4CQ9C0C4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEMA4CQ9C0C4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEMA4CQ9C0C4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SEMA4CQ9C0C4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SEMA4CQ9C0C4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.33□□□□□ -0.11
SEMA4CQ9C0C4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SEMA4CQ9C0C4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SEMA4CQ9C0C4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SEMA4CQ9C0C4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SEMA4CQ9C0C4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 RPL13AP19-201ENST00000434320 584 ntBASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 KRT18P66-201ENST00000452970 1269 ntBASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 AC138649.2-201ENST00000615886 705 ntBASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 AC087481.3-201ENST00000602886 1894 ntBASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SEMA4CQ9C0C4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 AC234644.1-201ENST00000406065 370 ntBASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 RN7SL818P-201ENST00000485099 259 ntBASIC14.32□□□□□ -0.12
SEMA4CQ9C0C4 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms