Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 AC092552.1-201ENST00000547243 906 ntBASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 LINC02560-201ENST00000596379 459 ntBASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 AC133539.2-201ENST00000604757 467 ntBASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRIM54Q9BYV2 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 BCRP1-201ENST00000444246 691 ntBASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 TMEM261P1-201ENST00000604899 340 ntBASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 AC008761.3-201ENST00000624803 892 ntBASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM54Q9BYV2 ST20-AS1-201ENST00000560255 4223 ntBASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 MYCLP2-201ENST00000449268 967 ntBASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 SPCS2P1-201ENST00000561636 679 ntBASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.9□□□□□ -0.02
TRIM54Q9BYV2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms