Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
NDNQ99608 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
NDNQ99608 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.18■□□□□ 0.02
NDNQ99608 AC027612.1-201ENST00000445234 2395 ntBASIC15.18■□□□□ 0.02
NDNQ99608 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.18■□□□□ 0.02
NDNQ99608 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDNQ99608 DRD5P1-201ENST00000456605 1438 ntBASIC15.17■□□□□ 0.02
NDNQ99608 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.17■□□□□ 0.02
NDNQ99608 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.17■□□□□ 0.02
NDNQ99608 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.17■□□□□ 0.02
NDNQ99608 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.17■□□□□ 0.02
NDNQ99608 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.17■□□□□ 0.02
NDNQ99608 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
NDNQ99608 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15.17■□□□□ 0.02
NDNQ99608 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NDNQ99608 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.17■□□□□ 0.02
NDNQ99608 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
NDNQ99608 AC097376.2-205ENST00000610159 5334 ntBASIC15.17■□□□□ 0.02
NDNQ99608 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.17■□□□□ 0.02
NDNQ99608 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NDNQ99608 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
NDNQ99608 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.17■□□□□ 0.02
NDNQ99608 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
NDNQ99608 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.17■□□□□ 0.02
NDNQ99608 PMS2P2-201ENST00000425039 1128 ntBASIC15.17■□□□□ 0.02
NDNQ99608 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 VDAC1P7-201ENST00000462417 847 ntBASIC15.17■□□□□ 0.02
NDNQ99608 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.17■□□□□ 0.02
NDNQ99608 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.17■□□□□ 0.02
NDNQ99608 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NDNQ99608 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.17■□□□□ 0.02
NDNQ99608 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.17■□□□□ 0.02
NDNQ99608 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.17■□□□□ 0.02
NDNQ99608 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NDNQ99608 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NDNQ99608 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NDNQ99608 AL139385.1-201ENST00000611744 3272 ntBASIC15.17■□□□□ 0.02
NDNQ99608 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NDNQ99608 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NDNQ99608 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.16■□□□□ 0.02
NDNQ99608 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 HAL-202ENST00000538703 2637 ntTSL 2 BASIC15.16■□□□□ 0.02
NDNQ99608 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
NDNQ99608 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.16■□□□□ 0.02
NDNQ99608 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 AC118758.2-201ENST00000614242 2813 ntBASIC15.16■□□□□ 0.02
NDNQ99608 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.16■□□□□ 0.02
NDNQ99608 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.16■□□□□ 0.02
NDNQ99608 UGT1A2P-201ENST00000454886 866 ntBASIC15.16■□□□□ 0.02
NDNQ99608 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.16■□□□□ 0.02
NDNQ99608 RN7SL399P-201ENST00000471648 279 ntBASIC15.16■□□□□ 0.02
NDNQ99608 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
NDNQ99608 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.16■□□□□ 0.02
NDNQ99608 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.16■□□□□ 0.02
NDNQ99608 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.16■□□□□ 0.02
NDNQ99608 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.16■□□□□ 0.02
NDNQ99608 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.16■□□□□ 0.02
NDNQ99608 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 AC018442.1-201ENST00000421439 2061 ntBASIC15.16■□□□□ 0.02
NDNQ99608 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NDNQ99608 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.16■□□□□ 0.02
NDNQ99608 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NDNQ99608 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
NDNQ99608 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NDNQ99608 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.16■□□□□ 0.02
NDNQ99608 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NDNQ99608 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NDNQ99608 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.16■□□□□ 0.02
NDNQ99608 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms