Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 CICP4-201ENST00000447359 2812 ntBASIC11.81□□□□□ -0.52
RAX2Q96IS3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.81□□□□□ -0.52
RAX2Q96IS3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 NUS1P3-201ENST00000423502 862 ntBASIC11.81□□□□□ -0.52
RAX2Q96IS3 AC026954.1-201ENST00000429771 1293 ntBASIC11.81□□□□□ -0.52
RAX2Q96IS3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 AC114812.1-204ENST00000449669 728 ntBASIC11.81□□□□□ -0.52
RAX2Q96IS3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 AC004066.1-201ENST00000502488 802 ntBASIC11.81□□□□□ -0.52
RAX2Q96IS3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 AL583810.1-201ENST00000553344 1045 ntBASIC11.81□□□□□ -0.52
RAX2Q96IS3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RAX2Q96IS3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAX2Q96IS3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
RAX2Q96IS3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.8□□□□□ -0.52
RAX2Q96IS3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 ST20-AS1-201ENST00000560255 4223 ntBASIC11.8□□□□□ -0.52
RAX2Q96IS3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.8□□□□□ -0.52
RAX2Q96IS3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RAX2Q96IS3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.8□□□□□ -0.52
RAX2Q96IS3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms