Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 AP006294.1-201ENST00000415407 339 ntBASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 GCOM2-201ENST00000509133 1104 ntBASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 AC068587.3-201ENST00000526613 355 ntBASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 AC027307.3-201ENST00000594262 1100 ntBASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 AC010319.3-201ENST00000597028 470 ntBASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 CLUHP2-201ENST00000426660 1303 ntBASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDLIM5Q96HC4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
PDLIM5Q96HC4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 ALG3P1-201ENST00000508806 1114 ntBASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 TDH-203ENST00000531764 1110 ntBASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 AC138466.3-201ENST00000619983 221 ntBASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.64□□□□□ -0.07
PDLIM5Q96HC4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 AC011495.1-201ENST00000498085 584 ntBASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 FTLP10-202ENST00000505798 471 ntBASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.63□□□□□ -0.07
PDLIM5Q96HC4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms