Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 CLUHP6-201ENST00000580789 941 ntBASIC13.69□□□□□ -0.22
LRRC46Q96FV0 AC103810.3-201ENST00000583567 96 ntBASIC13.69□□□□□ -0.22
LRRC46Q96FV0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 RPSAP52-203ENST00000622976 1023 ntBASIC13.69□□□□□ -0.22
LRRC46Q96FV0 MIR193BHG-211ENST00000641433 5365 ntBASIC13.69□□□□□ -0.22
LRRC46Q96FV0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 AL607033.1-201ENST00000623900 1599 ntBASIC13.69□□□□□ -0.22
LRRC46Q96FV0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRC46Q96FV0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 AP005117.1-202ENST00000581724 1908 ntBASIC13.68□□□□□ -0.22
LRRC46Q96FV0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 NUS1P3-201ENST00000423502 862 ntBASIC13.68□□□□□ -0.22
LRRC46Q96FV0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 AC005252.2-201ENST00000624630 1141 ntBASIC13.68□□□□□ -0.22
LRRC46Q96FV0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 CICP20-201ENST00000443330 2801 ntBASIC13.68□□□□□ -0.22
LRRC46Q96FV0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 KRT8P44-201ENST00000441609 1350 ntBASIC13.68□□□□□ -0.22
LRRC46Q96FV0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRC46Q96FV0 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LRRC46Q96FV0 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LRRC46Q96FV0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms