Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 ZBED1P1-201ENST00000502364 1930 ntBASIC13.56□□□□□ -0.24
CPNE4Q96A23 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.56□□□□□ -0.24
CPNE4Q96A23 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPNE4Q96A23 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 REXO1L2P-201ENST00000425429 2069 ntBASIC13.55□□□□□ -0.24
CPNE4Q96A23 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 AL359183.1-201ENST00000623796 2132 ntBASIC13.55□□□□□ -0.24
CPNE4Q96A23 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 CNN2P8-201ENST00000421872 913 ntBASIC13.55□□□□□ -0.24
CPNE4Q96A23 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 RPL7P3-201ENST00000441388 714 ntBASIC13.55□□□□□ -0.24
CPNE4Q96A23 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 AP000812.2-201ENST00000538934 718 ntBASIC13.55□□□□□ -0.24
CPNE4Q96A23 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 RHOXF1P1-202ENST00000635473 501 ntBASIC13.55□□□□□ -0.24
CPNE4Q96A23 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPNE4Q96A23 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.55□□□□□ -0.24
CPNE4Q96A23 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.54□□□□□ -0.24
CPNE4Q96A23 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.54□□□□□ -0.24
CPNE4Q96A23 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPNE4Q96A23 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPNE4Q96A23 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPNE4Q96A23 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPNE4Q96A23 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CPNE4Q96A23 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPNE4Q96A23 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CPNE4Q96A23 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.54□□□□□ -0.24
CPNE4Q96A23 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPNE4Q96A23 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPNE4Q96A23 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.54□□□□□ -0.24
CPNE4Q96A23 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.54□□□□□ -0.24
CPNE4Q96A23 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPNE4Q96A23 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.54□□□□□ -0.24
CPNE4Q96A23 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPNE4Q96A23 CD8B2-202ENST00000417670 633 ntBASIC13.54□□□□□ -0.24
CPNE4Q96A23 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.54□□□□□ -0.24
CPNE4Q96A23 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CPNE4Q96A23 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.54□□□□□ -0.24
CPNE4Q96A23 CTBP2P5-201ENST00000454986 1264 ntBASIC13.54□□□□□ -0.24
CPNE4Q96A23 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.54□□□□□ -0.24
CPNE4Q96A23 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.54□□□□□ -0.24
CPNE4Q96A23 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.54□□□□□ -0.24
CPNE4Q96A23 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.54□□□□□ -0.24
CPNE4Q96A23 AC133552.6-201ENST00000613406 534 ntBASIC13.54□□□□□ -0.24
CPNE4Q96A23 AC138951.2-201ENST00000623455 1161 ntBASIC13.54□□□□□ -0.24
CPNE4Q96A23 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CPNE4Q96A23 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms