Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
GCN1Q92616 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
GCN1Q92616 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCN1Q92616 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
GCN1Q92616 AC139143.1-201ENST00000441772 1207 ntBASIC12.64□□□□□ -0.39
GCN1Q92616 HINT1-208ENST00000513012 583 ntTSL 4 BASIC12.64□□□□□ -0.39
GCN1Q92616 HNRNPA1P7-201ENST00000521273 963 ntBASIC12.64□□□□□ -0.39
GCN1Q92616 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
GCN1Q92616 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC12.64□□□□□ -0.39
GCN1Q92616 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
GCN1Q92616 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
GCN1Q92616 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCN1Q92616 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCN1Q92616 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GCN1Q92616 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GCN1Q92616 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GCN1Q92616 AC005332.8-201ENST00000622750 2735 ntBASIC12.63□□□□□ -0.39
GCN1Q92616 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.63□□□□□ -0.39
GCN1Q92616 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.63□□□□□ -0.39
GCN1Q92616 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
GCN1Q92616 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.63□□□□□ -0.39
GCN1Q92616 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.63□□□□□ -0.39
GCN1Q92616 AGGF1P1-201ENST00000509500 2073 ntBASIC12.63□□□□□ -0.39
GCN1Q92616 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
GCN1Q92616 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
GCN1Q92616 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 MGST3-204ENST00000367888 778 ntTSL 3 BASIC12.63□□□□□ -0.39
GCN1Q92616 OR7E115P-201ENST00000382617 1024 ntBASIC12.63□□□□□ -0.39
GCN1Q92616 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
GCN1Q92616 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC12.63□□□□□ -0.39
GCN1Q92616 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC12.63□□□□□ -0.39
GCN1Q92616 KRT19P4-201ENST00000443208 943 ntBASIC12.63□□□□□ -0.39
GCN1Q92616 ATP5G1P7-201ENST00000444398 400 ntBASIC12.63□□□□□ -0.39
GCN1Q92616 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC12.63□□□□□ -0.39
GCN1Q92616 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GCN1Q92616 ELOBP2-201ENST00000526184 355 ntBASIC12.63□□□□□ -0.39
GCN1Q92616 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC12.63□□□□□ -0.39
GCN1Q92616 RN7SL827P-201ENST00000607480 288 ntBASIC12.63□□□□□ -0.39
GCN1Q92616 COG6-212ENST00000630730 186 ntTSL 5 BASIC12.63□□□□□ -0.39
GCN1Q92616 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC12.63□□□□□ -0.39
GCN1Q92616 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
GCN1Q92616 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
GCN1Q92616 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 TUBA3GP-201ENST00000410028 1325 ntBASIC12.63□□□□□ -0.39
GCN1Q92616 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC12.63□□□□□ -0.39
GCN1Q92616 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC12.63□□□□□ -0.39
GCN1Q92616 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC12.63□□□□□ -0.39
GCN1Q92616 PRDX2P3-201ENST00000515779 586 ntBASIC12.63□□□□□ -0.39
GCN1Q92616 AC103724.2-201ENST00000520355 476 ntBASIC12.63□□□□□ -0.39
GCN1Q92616 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.63□□□□□ -0.39
GCN1Q92616 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC12.63□□□□□ -0.39
GCN1Q92616 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCN1Q92616 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.63□□□□□ -0.39
GCN1Q92616 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GCN1Q92616 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.62□□□□□ -0.39
GCN1Q92616 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCN1Q92616 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC12.62□□□□□ -0.39
GCN1Q92616 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCN1Q92616 AC093462.1-201ENST00000621167 1683 ntBASIC12.62□□□□□ -0.39
GCN1Q92616 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCN1Q92616 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCN1Q92616 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GCN1Q92616 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
GCN1Q92616 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC12.62□□□□□ -0.39
GCN1Q92616 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.62□□□□□ -0.39
GCN1Q92616 AC092903.1-201ENST00000466506 262 ntBASIC12.62□□□□□ -0.39
GCN1Q92616 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC12.62□□□□□ -0.39
GCN1Q92616 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC12.62□□□□□ -0.39
GCN1Q92616 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.62□□□□□ -0.39
GCN1Q92616 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.62□□□□□ -0.39
GCN1Q92616 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCN1Q92616 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCN1Q92616 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
GCN1Q92616 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.62□□□□□ -0.39
GCN1Q92616 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.62□□□□□ -0.39
GCN1Q92616 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCN1Q92616 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCN1Q92616 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCN1Q92616 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC12.62□□□□□ -0.39
GCN1Q92616 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCN1Q92616 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms