Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CNOT9Q92600 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.92□□□□□ -0.18
CNOT9Q92600 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 RNU1-114P-201ENST00000365297 166 ntBASIC13.92□□□□□ -0.18
CNOT9Q92600 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.92□□□□□ -0.18
CNOT9Q92600 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CNOT9Q92600 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CNOT9Q92600 AL139094.1-201ENST00000405549 1188 ntBASIC13.92□□□□□ -0.18
CNOT9Q92600 SOCS2P1-201ENST00000417727 557 ntBASIC13.92□□□□□ -0.18
CNOT9Q92600 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.92□□□□□ -0.18
CNOT9Q92600 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.92□□□□□ -0.18
CNOT9Q92600 ELK1P1-201ENST00000485699 580 ntBASIC13.92□□□□□ -0.18
CNOT9Q92600 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.92□□□□□ -0.18
CNOT9Q92600 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.92□□□□□ -0.18
CNOT9Q92600 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.92□□□□□ -0.18
CNOT9Q92600 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.92□□□□□ -0.18
CNOT9Q92600 AC008494.3-201ENST00000606615 944 ntBASIC13.92□□□□□ -0.18
CNOT9Q92600 AC023090.2-201ENST00000625182 2110 ntBASIC13.92□□□□□ -0.18
CNOT9Q92600 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CNOT9Q92600 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.92□□□□□ -0.18
CNOT9Q92600 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.92□□□□□ -0.18
CNOT9Q92600 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CNOT9Q92600 AC005912.2-201ENST00000619492 2400 ntBASIC13.92□□□□□ -0.18
CNOT9Q92600 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
CNOT9Q92600 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.92□□□□□ -0.18
CNOT9Q92600 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CNOT9Q92600 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CNOT9Q92600 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CNOT9Q92600 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CNOT9Q92600 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CNOT9Q92600 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.91□□□□□ -0.18
CNOT9Q92600 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CNOT9Q92600 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.91□□□□□ -0.18
CNOT9Q92600 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
CNOT9Q92600 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.91□□□□□ -0.18
CNOT9Q92600 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.91□□□□□ -0.18
CNOT9Q92600 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT9Q92600 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT9Q92600 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
CNOT9Q92600 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT9Q92600 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT9Q92600 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CNOT9Q92600 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.91□□□□□ -0.18
CNOT9Q92600 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT9Q92600 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT9Q92600 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT9Q92600 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT9Q92600 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT9Q92600 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT9Q92600 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT9Q92600 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CNOT9Q92600 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.91□□□□□ -0.18
CNOT9Q92600 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT9Q92600 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.91□□□□□ -0.18
CNOT9Q92600 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT9Q92600 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CNOT9Q92600 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.91□□□□□ -0.18
CNOT9Q92600 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.91□□□□□ -0.18
CNOT9Q92600 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT9Q92600 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CNOT9Q92600 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT9Q92600 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.91□□□□□ -0.18
CNOT9Q92600 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT9Q92600 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.91□□□□□ -0.18
CNOT9Q92600 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.91□□□□□ -0.18
CNOT9Q92600 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.91□□□□□ -0.18
CNOT9Q92600 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.91□□□□□ -0.18
CNOT9Q92600 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT9Q92600 MIR4745-201ENST00000577608 62 ntBASIC13.91□□□□□ -0.18
CNOT9Q92600 CTBP2P3-201ENST00000585629 1255 ntBASIC13.91□□□□□ -0.18
CNOT9Q92600 AC133539.2-201ENST00000604757 467 ntBASIC13.91□□□□□ -0.18
CNOT9Q92600 AL355385.1-201ENST00000606123 409 ntBASIC13.91□□□□□ -0.18
CNOT9Q92600 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.91□□□□□ -0.18
CNOT9Q92600 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CNOT9Q92600 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.91□□□□□ -0.18
CNOT9Q92600 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CNOT9Q92600 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.91□□□□□ -0.18
CNOT9Q92600 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
CNOT9Q92600 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms