Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FNDC9Q8TBE3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FNDC9Q8TBE3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FNDC9Q8TBE3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
FNDC9Q8TBE3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
FNDC9Q8TBE3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FNDC9Q8TBE3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.6□□□□□ -0.23
FNDC9Q8TBE3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
FNDC9Q8TBE3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
FNDC9Q8TBE3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
FNDC9Q8TBE3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
FNDC9Q8TBE3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
FNDC9Q8TBE3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
FNDC9Q8TBE3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 KRT8P44-201ENST00000441609 1350 ntBASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 CNN2P8-201ENST00000421872 913 ntBASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 HLA-V-201ENST00000429037 534 ntBASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 HLA-K-203ENST00000430151 1046 ntBASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 FO681548.1-201ENST00000455617 1132 ntBASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 AC022616.1-201ENST00000518688 554 ntBASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 AC078819.1-201ENST00000547454 765 ntBASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 AC012085.1-201ENST00000548270 765 ntBASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 AC132938.4-201ENST00000623835 848 ntBASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 AC012508.2-201ENST00000567613 1472 ntBASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 AL360270.3-201ENST00000609118 1348 ntBASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 AC126365.1-201ENST00000578585 1514 ntBASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
FNDC9Q8TBE3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
FNDC9Q8TBE3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
FNDC9Q8TBE3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
FNDC9Q8TBE3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
FNDC9Q8TBE3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
FNDC9Q8TBE3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
FNDC9Q8TBE3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.58□□□□□ -0.23
FNDC9Q8TBE3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.23
FNDC9Q8TBE3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.58□□□□□ -0.23
FNDC9Q8TBE3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
FNDC9Q8TBE3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
FNDC9Q8TBE3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.58□□□□□ -0.23
FNDC9Q8TBE3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms