Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 BAATP1-201ENST00000412284 1225 ntBASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 AC012441.1-201ENST00000446669 685 ntBASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 AC010319.3-201ENST00000597028 470 ntBASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH19Q8TAB3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH19Q8TAB3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PCDH19Q8TAB3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDH19Q8TAB3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
PCDH19Q8TAB3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH19Q8TAB3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH19Q8TAB3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH19Q8TAB3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH19Q8TAB3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH19Q8TAB3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDH19Q8TAB3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 AC134312.5-201ENST00000568031 1313 ntBASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 TMEM14DP-201ENST00000422205 345 ntBASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 FO681548.1-201ENST00000455617 1132 ntBASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 AC145423.3-201ENST00000615987 467 ntBASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 AL162274.1-201ENST00000617191 1098 ntBASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 PCDHA3-202ENST00000532566 4594 ntBASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 AC003102.2-201ENST00000589195 1469 ntBASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH19Q8TAB3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH19Q8TAB3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms