Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIML2Q8N7C3 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 AC092135.3-201ENST00000624151 1846 ntBASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 AC211486.1-202ENST00000416371 468 ntBASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 BX842568.4-201ENST00000421222 227 ntBASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 AC211476.1-201ENST00000503899 468 ntBASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 AL671883.3-201ENST00000603274 991 ntBASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 AC099521.3-201ENST00000624251 2938 ntBASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 Z97205.2-201ENST00000564697 1639 ntBASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 AL356585.2-201ENST00000625078 2396 ntBASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIML2Q8N7C3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 AC010327.4-202ENST00000591484 748 ntBASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIML2Q8N7C3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.65□□□□□ -0.07
TRIML2Q8N7C3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIML2Q8N7C3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIML2Q8N7C3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRIML2Q8N7C3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.64□□□□□ -0.07
TRIML2Q8N7C3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms