Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 AC126335.2-201ENST00000623362 4637 ntBASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 AC114501.2-201ENST00000439631 535 ntBASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 TIMM17BP1-201ENST00000545713 516 ntBASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 AC011467.4-201ENST00000594891 528 ntBASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLIP4Q8N3C7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLIP4Q8N3C7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 AC104457.1-201ENST00000401024 814 ntBASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 AC241585.1-201ENST00000433527 519 ntBASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 AC009477.1-201ENST00000452936 217 ntBASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 IGHV3-42-201ENST00000520410 361 ntBASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 AC092337.1-201ENST00000568699 1129 ntBASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 AL645728.2-202ENST00000641679 227 ntBASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLIP4Q8N3C7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLIP4Q8N3C7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.19□□□□□ -0.14
CLIP4Q8N3C7 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.19□□□□□ -0.14
CLIP4Q8N3C7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.19□□□□□ -0.14
CLIP4Q8N3C7 AC012508.2-201ENST00000567613 1472 ntBASIC14.19□□□□□ -0.14
CLIP4Q8N3C7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.19□□□□□ -0.14
CLIP4Q8N3C7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLIP4Q8N3C7 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLIP4Q8N3C7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms