Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 POM121L8P-201ENST00000417732 1281 ntBASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 POM121L9P-203ENST00000441984 1285 ntBASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 RNA5SP486-201ENST00000515961 83 ntBASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 RN7SL718P-201ENST00000581254 303 ntBASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SCUBE3Q8IX30 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SCUBE3Q8IX30 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SCUBE3Q8IX30 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SCUBE3Q8IX30 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SCUBE3Q8IX30 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SCUBE3Q8IX30 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.83■□□□□ 0.13
SCUBE3Q8IX30 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.83■□□□□ 0.13
SCUBE3Q8IX30 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.83■□□□□ 0.13
SCUBE3Q8IX30 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 CNN2P8-201ENST00000421872 913 ntBASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 FAM197Y7-201ENST00000432892 766 ntBASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 AC092473.1-201ENST00000441098 221 ntBASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 AL590640.2-201ENST00000457038 527 ntBASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 ECM1P1-201ENST00000604092 1279 ntBASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 CLUHP2-201ENST00000426660 1303 ntBASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SCUBE3Q8IX30 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 LINC01101-201ENST00000622953 1884 ntBASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SCUBE3Q8IX30 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms