Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 ADH5P3-201ENST00000433842 1137 ntBASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 SLC25A39P2-201ENST00000537614 270 ntBASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM42Q8IWZ5 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 AC018665.1-201ENST00000622927 1362 ntBASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM42Q8IWZ5 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 KRT8P22-201ENST00000562317 1415 ntBASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM42Q8IWZ5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms