Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 AC013553.1-201ENST00000560906 267 ntBASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 MIR3180-2-201ENST00000581748 88 ntBASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS13BQ7Z7G8 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 SALL4P5-201ENST00000419001 1760 ntBASIC9□□□□□ -0.97
VPS13BQ7Z7G8 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 CICP12-201ENST00000455801 843 ntBASIC9□□□□□ -0.97
VPS13BQ7Z7G8 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 FOXN3-AS2-201ENST00000554071 1262 ntBASIC9□□□□□ -0.97
VPS13BQ7Z7G8 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 AC105917.1-201ENST00000506637 2539 ntBASIC9□□□□□ -0.97
VPS13BQ7Z7G8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 AC087392.5-201ENST00000612517 489 ntBASIC9□□□□□ -0.97
VPS13BQ7Z7G8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 ZNF436-AS1-201ENST00000335648 2547 ntBASIC9□□□□□ -0.97
VPS13BQ7Z7G8 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 AC108734.2-201ENST00000420887 1069 ntBASIC9□□□□□ -0.97
VPS13BQ7Z7G8 AC006529.1-201ENST00000459978 637 ntBASIC9□□□□□ -0.97
VPS13BQ7Z7G8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 AC018846.1-201ENST00000568231 183 ntBASIC9□□□□□ -0.97
VPS13BQ7Z7G8 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS13BQ7Z7G8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 KRT18P36-201ENST00000411618 1276 ntBASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS13BQ7Z7G8 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms