Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC19.94■□□□□ 0.78
KRT28Q7Z3Y7 AQP7P3-201ENST00000624547 1041 ntBASIC19.94■□□□□ 0.78
KRT28Q7Z3Y7 AL451007.2-201ENST00000632004 563 ntBASIC19.94■□□□□ 0.78
KRT28Q7Z3Y7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
KRT28Q7Z3Y7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KRT28Q7Z3Y7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT28Q7Z3Y7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.94■□□□□ 0.78
KRT28Q7Z3Y7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.94■□□□□ 0.78
KRT28Q7Z3Y7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC19.94■□□□□ 0.78
KRT28Q7Z3Y7 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 AL512306.1-201ENST00000432698 848 ntBASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 RPS23-204ENST00000507980 836 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 AP001527.2-201ENST00000614441 631 ntBASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 KRT8P28-201ENST00000433288 1390 ntBASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC19.93■□□□□ 0.78
KRT28Q7Z3Y7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 AL118516.1-201ENST00000564152 670 ntBASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC19.92■□□□□ 0.78
KRT28Q7Z3Y7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 AC073869.2-201ENST00000417338 1026 ntBASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 KRT8P1-201ENST00000557533 1207 ntBASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 AP003392.6-201ENST00000607709 325 ntBASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 AC007250.1-201ENST00000608934 338 ntBASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT28Q7Z3Y7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms