Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 HLA-H-201ENST00000383620 1096 ntBASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 COX5BP8-201ENST00000416911 349 ntBASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 CETN4P-206ENST00000642099 2168 ntBASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 MYO15B-237ENST00000642007 4893 ntBASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXR1Q6PIV2 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 AC134407.2-201ENST00000625089 1978 ntBASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 RNA5SP410-201ENST00000516285 106 ntBASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 AL132655.2-201ENST00000596276 594 ntBASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXR1Q6PIV2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXR1Q6PIV2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms