Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 AL591122.2-201ENST00000624125 1853 ntBASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 AC002044.2-201ENST00000624910 970 ntBASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC9.76□□□□□ -0.85
VPS13DQ5THJ4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 RPL35P9-201ENST00000446059 350 ntBASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 F11R-204ENST00000537746 1245 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AL035414.1-201ENST00000451327 857 ntBASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AC063952.3-201ENST00000467756 308 ntBASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AL136172.1-201ENST00000598590 1394 ntBASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AL592076.1-201ENST00000424448 303 ntBASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AC098934.1-203ENST00000442868 1262 ntBASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 GDNF-207ENST00000515058 764 ntTSL 5 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 CYP4F36P-201ENST00000589193 186 ntBASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AC104506.1-201ENST00000609247 429 ntBASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AC010976.2-201ENST00000609697 852 ntBASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 SCARNA12-201ENST00000459155 270 ntBASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC9.75□□□□□ -0.85
VPS13DQ5THJ4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC9.74□□□□□ -0.85
VPS13DQ5THJ4 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms