Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.8□□□□□ -0.04
SFT2D3Q587I9 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 MST1P2-201ENST00000457982 2291 ntBASIC14.8□□□□□ -0.04
SFT2D3Q587I9 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.8□□□□□ -0.04
SFT2D3Q587I9 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 AC136604.1-201ENST00000418535 575 ntBASIC14.79□□□□□ -0.04
SFT2D3Q587I9 MEP1AP4-201ENST00000423244 1087 ntBASIC14.79□□□□□ -0.04
SFT2D3Q587I9 SLC7A15P-201ENST00000424028 1363 ntBASIC14.79□□□□□ -0.04
SFT2D3Q587I9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 RPL13P2-201ENST00000440687 659 ntBASIC14.79□□□□□ -0.04
SFT2D3Q587I9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 AC140912.1-201ENST00000577171 1054 ntBASIC14.79□□□□□ -0.04
SFT2D3Q587I9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.79□□□□□ -0.04
SFT2D3Q587I9 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.78□□□□□ -0.04
SFT2D3Q587I9 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms