Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
KHDC1Q4VXA5 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 CICP8-201ENST00000455800 2813 ntBASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 COL6A4P2-202ENST00000504443 2753 ntBASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 AC098614.1-201ENST00000368528 745 ntBASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 C1QBPP1-201ENST00000400117 770 ntBASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 RN7SL837P-201ENST00000463010 287 ntBASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 RN7SL752P-201ENST00000463779 287 ntBASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 AC132938.2-201ENST00000579188 680 ntBASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 AL033527.5-201ENST00000641382 801 ntBASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 AL591163.1-201ENST00000641757 987 ntBASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KHDC1Q4VXA5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 AL365209.1-201ENST00000624418 6473 ntBASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 KRT8P22-201ENST00000562317 1415 ntBASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 AC133539.2-201ENST00000604757 467 ntBASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms