Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 AC104306.2-201ENST00000451877 341 ntBASIC18.41■□□□□ 0.54
ATP2B3Q16720 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2B3Q16720 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 AC104982.3-201ENST00000581995 514 ntBASIC18.41■□□□□ 0.54
ATP2B3Q16720 AP001002.3-201ENST00000623482 206 ntBASIC18.41■□□□□ 0.54
ATP2B3Q16720 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2B3Q16720 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2B3Q16720 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2B3Q16720 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2B3Q16720 AL138725.1-201ENST00000407347 1314 ntBASIC18.41■□□□□ 0.54
ATP2B3Q16720 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2B3Q16720 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2B3Q16720 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.41■□□□□ 0.54
ATP2B3Q16720 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 AC099548.2-209ENST00000480264 625 ntBASIC18.4■□□□□ 0.54
ATP2B3Q16720 ZNF767P-206ENST00000513792 565 ntBASIC18.4■□□□□ 0.54
ATP2B3Q16720 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 AC020907.1-201ENST00000616460 1350 ntBASIC18.4■□□□□ 0.54
ATP2B3Q16720 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ATP2B3Q16720 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP2B3Q16720 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.39■□□□□ 0.54
ATP2B3Q16720 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.39■□□□□ 0.54
ATP2B3Q16720 AC023908.3-201ENST00000564211 3047 ntBASIC18.39■□□□□ 0.54
ATP2B3Q16720 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.39■□□□□ 0.54
ATP2B3Q16720 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B3Q16720 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B3Q16720 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ATP2B3Q16720 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP2B3Q16720 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B3Q16720 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B3Q16720 MIR663B-201ENST00000408361 115 ntBASIC18.39■□□□□ 0.53
ATP2B3Q16720 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.39■□□□□ 0.53
ATP2B3Q16720 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ATP2B3Q16720 AC006033.1-201ENST00000440505 426 ntBASIC18.39■□□□□ 0.53
ATP2B3Q16720 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP2B3Q16720 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B3Q16720 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B3Q16720 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B3Q16720 AC100850.1-201ENST00000506768 649 ntBASIC18.39■□□□□ 0.53
ATP2B3Q16720 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP2B3Q16720 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP2B3Q16720 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
ATP2B3Q16720 MIR6787-201ENST00000616675 61 ntBASIC18.39■□□□□ 0.53
ATP2B3Q16720 AL008638.5-201ENST00000623814 1298 ntBASIC18.39■□□□□ 0.53
ATP2B3Q16720 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.39■□□□□ 0.53
ATP2B3Q16720 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP2B3Q16720 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP2B3Q16720 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.39■□□□□ 0.53
ATP2B3Q16720 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B3Q16720 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP2B3Q16720 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP2B3Q16720 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP2B3Q16720 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms