Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
FOXC1Q12948 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
FOXC1Q12948 RN7SL357P-201ENST00000581065 298 ntBASIC14.03□□□□□ -0.16
FOXC1Q12948 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
FOXC1Q12948 AL355816.2-201ENST00000610049 647 ntBASIC14.03□□□□□ -0.16
FOXC1Q12948 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXC1Q12948 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXC1Q12948 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.03□□□□□ -0.16
FOXC1Q12948 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
FOXC1Q12948 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXC1Q12948 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
FOXC1Q12948 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXC1Q12948 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXC1Q12948 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXC1Q12948 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
FOXC1Q12948 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXC1Q12948 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
FOXC1Q12948 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
FOXC1Q12948 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXC1Q12948 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXC1Q12948 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
FOXC1Q12948 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXC1Q12948 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXC1Q12948 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.02□□□□□ -0.16
FOXC1Q12948 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXC1Q12948 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXC1Q12948 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXC1Q12948 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXC1Q12948 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
FOXC1Q12948 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXC1Q12948 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FOXC1Q12948 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXC1Q12948 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.02□□□□□ -0.16
FOXC1Q12948 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.02□□□□□ -0.16
FOXC1Q12948 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FOXC1Q12948 TMBIM7P-202ENST00000641474 1516 ntBASIC14.02□□□□□ -0.16
FOXC1Q12948 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FOXC1Q12948 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
FOXC1Q12948 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 AL138725.1-201ENST00000407347 1314 ntBASIC14.02□□□□□ -0.17
FOXC1Q12948 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
FOXC1Q12948 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.02□□□□□ -0.17
FOXC1Q12948 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXC1Q12948 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 AC004522.1-201ENST00000419978 654 ntBASIC14.02□□□□□ -0.17
FOXC1Q12948 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.02□□□□□ -0.17
FOXC1Q12948 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.02□□□□□ -0.17
FOXC1Q12948 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.02□□□□□ -0.17
FOXC1Q12948 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXC1Q12948 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.02□□□□□ -0.17
FOXC1Q12948 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.02□□□□□ -0.17
FOXC1Q12948 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.02□□□□□ -0.17
FOXC1Q12948 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.02□□□□□ -0.17
FOXC1Q12948 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.02□□□□□ -0.17
FOXC1Q12948 AC021321.1-201ENST00000607397 1113 ntBASIC14.02□□□□□ -0.17
FOXC1Q12948 AC010976.2-201ENST00000609697 852 ntBASIC14.02□□□□□ -0.17
FOXC1Q12948 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
FOXC1Q12948 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 AC124067.4-201ENST00000519691 2379 ntBASIC14.02□□□□□ -0.17
FOXC1Q12948 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FOXC1Q12948 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
FOXC1Q12948 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.01□□□□□ -0.17
FOXC1Q12948 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.01□□□□□ -0.17
FOXC1Q12948 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
FOXC1Q12948 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
FOXC1Q12948 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FOXC1Q12948 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms