Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 KRT18P25-201ENST00000508931 1278 ntBASIC15.22■□□□□ 0.03
CDH17Q12864 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH17Q12864 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH17Q12864 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH17Q12864 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH17Q12864 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH17Q12864 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH17Q12864 MIR4745-201ENST00000577608 62 ntBASIC15.22■□□□□ 0.03
CDH17Q12864 CLUHP6-201ENST00000580789 941 ntBASIC15.22■□□□□ 0.03
CDH17Q12864 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.22■□□□□ 0.03
CDH17Q12864 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH17Q12864 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CDH17Q12864 CU634019.7-201ENST00000624153 1185 ntBASIC15.22■□□□□ 0.03
CDH17Q12864 FP236241.2-201ENST00000624906 1185 ntBASIC15.22■□□□□ 0.03
CDH17Q12864 AC067750.1-201ENST00000608826 6545 ntBASIC15.22■□□□□ 0.03
CDH17Q12864 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDH17Q12864 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDH17Q12864 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
CDH17Q12864 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDH17Q12864 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDH17Q12864 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH17Q12864 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH17Q12864 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH17Q12864 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH17Q12864 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
CDH17Q12864 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH17Q12864 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH17Q12864 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH17Q12864 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CDH17Q12864 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH17Q12864 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CDH17Q12864 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDH17Q12864 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH17Q12864 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CDH17Q12864 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CDH17Q12864 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDH17Q12864 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH17Q12864 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH17Q12864 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH17Q12864 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH17Q12864 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH17Q12864 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.21■□□□□ 0.03
CDH17Q12864 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH17Q12864 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.21■□□□□ 0.03
CDH17Q12864 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH17Q12864 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH17Q12864 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDH17Q12864 WFDC1-204ENST00000613603 549 ntBASIC15.21■□□□□ 0.03
CDH17Q12864 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH17Q12864 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDH17Q12864 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDH17Q12864 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH17Q12864 AP001267.2-201ENST00000532619 2086 ntBASIC15.21■□□□□ 0.03
CDH17Q12864 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH17Q12864 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDH17Q12864 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.21■□□□□ 0.02
CDH17Q12864 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.21■□□□□ 0.02
CDH17Q12864 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH17Q12864 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CDH17Q12864 SNX18-202ENST00000343017 3140 ntBASIC15.21■□□□□ 0.02
CDH17Q12864 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.21■□□□□ 0.02
CDH17Q12864 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH17Q12864 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
CDH17Q12864 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CDH17Q12864 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH17Q12864 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDH17Q12864 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH17Q12864 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CDH17Q12864 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH17Q12864 AC097359.2-201ENST00000604992 2389 ntBASIC15.2■□□□□ 0.02
CDH17Q12864 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH17Q12864 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH17Q12864 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH17Q12864 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDH17Q12864 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH17Q12864 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDH17Q12864 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH17Q12864 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH17Q12864 AC139749.1-202ENST00000617529 3139 ntBASIC15.2■□□□□ 0.02
CDH17Q12864 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH17Q12864 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH17Q12864 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH17Q12864 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CDH17Q12864 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH17Q12864 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH17Q12864 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms