Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 WFDC1-204ENST00000613603 549 ntBASIC16.07■□□□□ 0.16
CDR2Q01850 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.07■□□□□ 0.16
CDR2Q01850 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
CDR2Q01850 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.07■□□□□ 0.16
CDR2Q01850 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CDR2Q01850 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDR2Q01850 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDR2Q01850 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDR2Q01850 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDR2Q01850 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.07■□□□□ 0.16
CDR2Q01850 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.07■□□□□ 0.16
CDR2Q01850 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.07■□□□□ 0.16
CDR2Q01850 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.07■□□□□ 0.16
CDR2Q01850 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDR2Q01850 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDR2Q01850 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDR2Q01850 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.07■□□□□ 0.16
CDR2Q01850 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDR2Q01850 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CDR2Q01850 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDR2Q01850 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CDR2Q01850 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 AP001267.2-201ENST00000532619 2086 ntBASIC16.06■□□□□ 0.16
CDR2Q01850 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.06■□□□□ 0.16
CDR2Q01850 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.06■□□□□ 0.16
CDR2Q01850 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CDR2Q01850 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 ACTBP8-201ENST00000403258 1108 ntBASIC16.06■□□□□ 0.16
CDR2Q01850 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
CDR2Q01850 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 AL162726.2-201ENST00000438986 1017 ntBASIC16.06■□□□□ 0.16
CDR2Q01850 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.06■□□□□ 0.16
CDR2Q01850 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.06■□□□□ 0.16
CDR2Q01850 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.06■□□□□ 0.16
CDR2Q01850 AC190387.1-201ENST00000551683 408 ntBASIC16.06■□□□□ 0.16
CDR2Q01850 WASH4P-201ENST00000564273 1246 ntBASIC16.06■□□□□ 0.16
CDR2Q01850 AP001063.1-201ENST00000568332 529 ntBASIC16.06■□□□□ 0.16
CDR2Q01850 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.06■□□□□ 0.16
CDR2Q01850 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDR2Q01850 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.06■□□□□ 0.16
CDR2Q01850 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.06■□□□□ 0.16
CDR2Q01850 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CDR2Q01850 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDR2Q01850 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 AC097359.2-201ENST00000604992 2389 ntBASIC16.06■□□□□ 0.16
CDR2Q01850 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDR2Q01850 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.06■□□□□ 0.16
CDR2Q01850 BX640514.1-201ENST00000583223 1918 ntBASIC16.06■□□□□ 0.16
CDR2Q01850 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDR2Q01850 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.05■□□□□ 0.16
CDR2Q01850 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDR2Q01850 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDR2Q01850 CICP4-201ENST00000447359 2812 ntBASIC16.05■□□□□ 0.16
CDR2Q01850 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDR2Q01850 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDR2Q01850 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.05■□□□□ 0.16
CDR2Q01850 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.05■□□□□ 0.16
CDR2Q01850 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDR2Q01850 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDR2Q01850 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDR2Q01850 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDR2Q01850 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDR2Q01850 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDR2Q01850 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.05■□□□□ 0.16
CDR2Q01850 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDR2Q01850 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.05■□□□□ 0.16
CDR2Q01850 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.05■□□□□ 0.16
CDR2Q01850 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDR2Q01850 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.05■□□□□ 0.16
CDR2Q01850 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.05■□□□□ 0.16
CDR2Q01850 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms