Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.41□□□□□ -0.26
EFNB1P98172 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.41□□□□□ -0.26
EFNB1P98172 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 DGCR9-201ENST00000609630 2415 ntBASIC13.41□□□□□ -0.26
EFNB1P98172 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 AC011498.7-201ENST00000624986 2027 ntBASIC13.41□□□□□ -0.26
EFNB1P98172 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
EFNB1P98172 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
EFNB1P98172 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 AC211486.1-202ENST00000416371 468 ntBASIC13.41□□□□□ -0.26
EFNB1P98172 TSSK5P-201ENST00000423978 907 ntBASIC13.41□□□□□ -0.26
EFNB1P98172 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.41□□□□□ -0.26
EFNB1P98172 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.41□□□□□ -0.26
EFNB1P98172 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.41□□□□□ -0.26
EFNB1P98172 FAM86LP-201ENST00000478302 853 ntBASIC13.41□□□□□ -0.26
EFNB1P98172 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
EFNB1P98172 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 AC211476.1-201ENST00000503899 468 ntBASIC13.41□□□□□ -0.26
EFNB1P98172 AC069120.2-201ENST00000524091 540 ntBASIC13.41□□□□□ -0.26
EFNB1P98172 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.41□□□□□ -0.26
EFNB1P98172 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
EFNB1P98172 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.41□□□□□ -0.26
EFNB1P98172 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
EFNB1P98172 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.41□□□□□ -0.26
EFNB1P98172 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.41□□□□□ -0.26
EFNB1P98172 AC138761.1-201ENST00000584393 385 ntBASIC13.41□□□□□ -0.26
EFNB1P98172 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
EFNB1P98172 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
EFNB1P98172 AC010327.4-202ENST00000591484 748 ntBASIC13.41□□□□□ -0.26
EFNB1P98172 SRD5A3P1-201ENST00000603021 949 ntBASIC13.41□□□□□ -0.26
EFNB1P98172 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.41□□□□□ -0.26
EFNB1P98172 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.41□□□□□ -0.26
EFNB1P98172 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.41□□□□□ -0.26
EFNB1P98172 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.41□□□□□ -0.26
EFNB1P98172 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.41□□□□□ -0.26
EFNB1P98172 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.41□□□□□ -0.26
EFNB1P98172 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.41□□□□□ -0.26
EFNB1P98172 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
EFNB1P98172 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 HSPA8P5-201ENST00000456928 2069 ntBASIC13.41□□□□□ -0.26
EFNB1P98172 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
EFNB1P98172 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
EFNB1P98172 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
EFNB1P98172 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
EFNB1P98172 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
EFNB1P98172 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
EFNB1P98172 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
EFNB1P98172 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
EFNB1P98172 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.4□□□□□ -0.26
EFNB1P98172 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
EFNB1P98172 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.4□□□□□ -0.26
EFNB1P98172 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.4□□□□□ -0.26
EFNB1P98172 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.4□□□□□ -0.26
EFNB1P98172 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
EFNB1P98172 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.4□□□□□ -0.26
EFNB1P98172 CNN2P11-201ENST00000429351 262 ntBASIC13.4□□□□□ -0.26
EFNB1P98172 AP006288.1-201ENST00000446065 395 ntBASIC13.4□□□□□ -0.26
EFNB1P98172 AC097493.3-201ENST00000509725 367 ntBASIC13.4□□□□□ -0.26
EFNB1P98172 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
EFNB1P98172 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.4□□□□□ -0.26
EFNB1P98172 RARRES2P5-201ENST00000564013 466 ntBASIC13.4□□□□□ -0.26
EFNB1P98172 AC140878.1-201ENST00000565277 250 ntBASIC13.4□□□□□ -0.26
EFNB1P98172 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms