Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.76■□□□□ 0.11
IRX4P78413 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
IRX4P78413 AC005229.1-201ENST00000392885 409 ntBASIC15.76■□□□□ 0.11
IRX4P78413 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.76■□□□□ 0.11
IRX4P78413 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.76■□□□□ 0.11
IRX4P78413 GOLGA2P4-201ENST00000441462 777 ntBASIC15.76■□□□□ 0.11
IRX4P78413 PFN1P12-201ENST00000455938 534 ntBASIC15.76■□□□□ 0.11
IRX4P78413 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.76■□□□□ 0.11
IRX4P78413 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.76■□□□□ 0.11
IRX4P78413 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.76■□□□□ 0.11
IRX4P78413 AL359711.2-201ENST00000563105 872 ntBASIC15.76■□□□□ 0.11
IRX4P78413 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.76■□□□□ 0.11
IRX4P78413 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.76■□□□□ 0.11
IRX4P78413 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.76■□□□□ 0.11
IRX4P78413 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.76■□□□□ 0.11
IRX4P78413 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.76■□□□□ 0.11
IRX4P78413 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
IRX4P78413 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.76■□□□□ 0.11
IRX4P78413 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.76■□□□□ 0.11
IRX4P78413 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.76■□□□□ 0.11
IRX4P78413 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.76■□□□□ 0.11
IRX4P78413 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
IRX4P78413 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.76■□□□□ 0.11
IRX4P78413 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.76■□□□□ 0.11
IRX4P78413 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.76■□□□□ 0.11
IRX4P78413 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
IRX4P78413 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.76■□□□□ 0.11
IRX4P78413 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
IRX4P78413 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
IRX4P78413 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
IRX4P78413 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
IRX4P78413 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
IRX4P78413 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.75■□□□□ 0.11
IRX4P78413 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.75■□□□□ 0.11
IRX4P78413 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 AC007551.1-201ENST00000457394 519 ntBASIC15.75■□□□□ 0.11
IRX4P78413 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.75■□□□□ 0.11
IRX4P78413 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.75■□□□□ 0.11
IRX4P78413 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.75■□□□□ 0.11
IRX4P78413 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 MIR3615-201ENST00000581999 87 ntBASIC15.75■□□□□ 0.11
IRX4P78413 AL158212.4-201ENST00000624062 1286 ntBASIC15.75■□□□□ 0.11
IRX4P78413 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.75■□□□□ 0.11
IRX4P78413 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
IRX4P78413 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
IRX4P78413 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.75■□□□□ 0.11
IRX4P78413 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
IRX4P78413 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.75■□□□□ 0.11
IRX4P78413 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IRX4P78413 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
IRX4P78413 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.74■□□□□ 0.11
IRX4P78413 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IRX4P78413 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms