Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.27□□□□□ -0.13
GABREP78334 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABREP78334 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABREP78334 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.27□□□□□ -0.13
GABREP78334 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABREP78334 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
GABREP78334 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.27□□□□□ -0.13
GABREP78334 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GABREP78334 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABREP78334 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
GABREP78334 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABREP78334 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABREP78334 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GABREP78334 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
GABREP78334 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GABREP78334 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABREP78334 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABREP78334 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
GABREP78334 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 TSPY26P-202ENST00000565928 3884 ntBASIC14.26□□□□□ -0.13
GABREP78334 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.26□□□□□ -0.13
GABREP78334 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 E2F3P2-201ENST00000447755 1422 ntBASIC14.26□□□□□ -0.13
GABREP78334 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.26□□□□□ -0.13
GABREP78334 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
GABREP78334 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.26□□□□□ -0.13
GABREP78334 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
GABREP78334 AC026316.1-201ENST00000398900 414 ntBASIC14.26□□□□□ -0.13
GABREP78334 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
GABREP78334 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 AL355334.1-201ENST00000417713 215 ntBASIC14.26□□□□□ -0.13
GABREP78334 RN7SL181P-201ENST00000462921 277 ntBASIC14.26□□□□□ -0.13
GABREP78334 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.26□□□□□ -0.13
GABREP78334 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 AC242376.1-201ENST00000559033 726 ntBASIC14.26□□□□□ -0.13
GABREP78334 SNORD3B-2-202ENST00000571722 791 ntBASIC14.26□□□□□ -0.13
GABREP78334 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.26□□□□□ -0.13
GABREP78334 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 AL132994.2-201ENST00000603120 687 ntBASIC14.26□□□□□ -0.13
GABREP78334 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.26□□□□□ -0.13
GABREP78334 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.26□□□□□ -0.13
GABREP78334 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.26□□□□□ -0.13
GABREP78334 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GABREP78334 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
GABREP78334 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.25□□□□□ -0.13
GABREP78334 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.25□□□□□ -0.13
GABREP78334 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
GABREP78334 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.25□□□□□ -0.13
GABREP78334 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABREP78334 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms