Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 AC084346.2-201ENST00000607097 949 ntBASIC17.27■□□□□ 0.36
CHMP4BP1P59074 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHMP4BP1P59074 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CHMP4BP1P59074 CICP4-201ENST00000447359 2812 ntBASIC17.27■□□□□ 0.35
CHMP4BP1P59074 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.27■□□□□ 0.35
CHMP4BP1P59074 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.27■□□□□ 0.35
CHMP4BP1P59074 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP4BP1P59074 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP4BP1P59074 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHMP4BP1P59074 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 AC091951.1-201ENST00000512854 2465 ntBASIC17.26■□□□□ 0.35
CHMP4BP1P59074 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 AC103810.3-201ENST00000583567 96 ntBASIC17.26■□□□□ 0.35
CHMP4BP1P59074 AC008687.7-202ENST00000637404 953 ntBASIC17.26■□□□□ 0.35
CHMP4BP1P59074 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 AC007191.1-201ENST00000623179 2995 ntBASIC17.26■□□□□ 0.35
CHMP4BP1P59074 AC139749.1-202ENST00000617529 3139 ntBASIC17.26■□□□□ 0.35
CHMP4BP1P59074 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 LINC00528-201ENST00000600723 2160 ntBASIC17.26■□□□□ 0.35
CHMP4BP1P59074 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CHMP4BP1P59074 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP4BP1P59074 CNN2P8-201ENST00000421872 913 ntBASIC17.25■□□□□ 0.35
CHMP4BP1P59074 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms